Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809413.1_cds_XP_016495731.1_10021
CDS Infomation

[gene=LOC107814783] [db_xref=GeneID:107814783] [protein=phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like] [protein_id=XP_016495731.1] [location=complement(join(7023..7526,7687..7756,8004..8134,8276..8322,8585..8661,8736..8800,8886..8972,9071..9247,11004..11069,11698..11754,11843..11944,12190..12615))] [gbkey=CDS]
Sequence

ATGGAATCTGAATCCACTAGTTCATCTCCACATCTCTCCAGTAAATCTTCTGATGCTGAA
GCTCCCAAGCCAGTTGCTTCCCAGAAAGATAATGCTGCTCAGGACACATCTAAGTCGCAT
ACATCGGCCATATCATCTTGGGCGAAAACCTTAAACTTTCCACAGCCTGTAGCGCCTGGG
CAACAGGGGTCAGCAATTGGAGATACTGGGACATCTACATTCTCACGTTTTGCTAGTGGT
CTTGGTTTGCCATTCACTTCGAAAGCTTCTGAGGCAAATGATAGTGCTGGAGGCAACTCA
CCAACCACACAATCAGGTGTGTTTGAATCAATAACTAAAGGGCTAATTGACACATCTCTG
AATGCTGTGAAGGCTGTGCAAGTTAAGGCACGACATGCAGTATCTCAGAACAAGCGAAGA
TACCAGGAGGGTGGATTTGATTTGGATATGACTTACATAACAGAGAATATCATAGCTATG
GGTTTTCCTGCAGGCGACATGAGCTCTGGTTTCTTTGGATATGTTGAGGGGTTCTACCGA
AATCACATGGAGGAAGTGATAAAATTTTTCGAGACTCATCATAAGGGAAAGTACAAAGTT
TATAATCTTTGTTCAGAGAGATTGTATGATGCTTCACTATTTGGGGGAAAGGTTGCATCT
TTCCCATTTGATGATCACAACTGCCCGCCAATTCATCTTATAAAACTGTTTTGCCAAAGT
GCATATTCGTGGTTGAAGGAGGACATTCTAAATGTGGTAGTTGTACATTGTAAAGCTGGA
ATGGCTAGGACAGGGCTTATGATTTGTAGCCTCCTTCTGTTCTTGAAGTTTTTCCCAACA
GCTGAGGAATGCATCAACTATTATAACCAAAAAAGATGTGTAGATGGGAAGGCCCTTATT
CTTCTAAGTCAGATTAGGTATGTAAAATATTTTGAGCGCATTTTGACTCAATTCGGTGGT
GAAACTCCTCCTGGACGTAGGTGCATGCTGAGAGGATTTCGATTCCACAAGTGTTCATCC
TGGATAAGGCCTTCAATTACAATATCTAGTCACAGTGGCATCCTGTTTTCTACAAAAAAA
CATCCGAAGACTAGGGACCTTATGCCTGAAGATTTTTGGATACGAACACAAAGAAAAGGA
ATTATGGTTTTTGCTCTACCTGGTGAACCTGGTCTAACTGAATTGGCAGGCGACTTCAAG
ATCTATTTTCATGATCGCCAAGGAGATTTCTACTGCTGGTTAAACACGTCAATGATGGAA
AACAGACTGATTTTAGGTGTCTCGGAATTGGATGGCTTTGATAAGAGGAAACTACCATCT
CCTGGATTCCAAGTTGAGATTGTGATGGTAGATTATGATGGAAGTGTTCCAGTAAAGTCC
AAGGCTGATGGTGCCGCCAAAGGAAAGGACCCAAGACAAGGAAACAGTTCTTCATCCAGT
GAAGGAATTAAAGGTAATTTGAACAAAAACAAGGTATCGGGGGGCCAAAACCATGGTGAT
GATGTATTTTCAGATAGCGATGGGGAGGAAGCTGCACCTTCCAGTACAAAAAGTCAGACA
AGTGCTTCACAAACTGCTGCTGCAGGTGTTGATTCTGGCTCCCAAAAGGAGCAGATTGCC
AATCTAACACATAACGCCGAACAACTTTCTCTTAGGAGCAGCGATCCTAAAAGTGGTGCA
AGCGAGATCAAGGATGAGACAGTTGAGAGAGCTGCCATTCCGAATCTGGGCTCAAGTGAT
ATTAAGGCCATTGCAGCAGATGCATCTGTGTTCAGTTTTGGAGACGATGACGATTATGAA
AGTGAATAA

Peptide Sequence

PEP ID

XP_016495731.1
PEP Infomation

PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like [Nicotiana tabacum]
Sequence

MESESTSSSPHLSSKSSDAEAPKPVASQKDNAAQDTSKSHTSAISSWAKTLNFPQPVAPG
QQGSAIGDTGTSTFSRFASGLGLPFTSKASEANDSAGGNSPTTQSGVFESITKGLIDTSL
NAVKAVQVKARHAVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYR
NHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFGGKVASFPFDDHNCPPIHLIKLFCQS
AYSWLKEDILNVVVVHCKAGMARTGLMICSLLLFLKFFPTAEECINYYNQKRCVDGKALI
LLSQIRYVKYFERILTQFGGETPPGRRCMLRGFRFHKCSSWIRPSITISSHSGILFSTKK
HPKTRDLMPEDFWIRTQRKGIMVFALPGEPGLTELAGDFKIYFHDRQGDFYCWLNTSMME
NRLILGVSELDGFDKRKLPSPGFQVEIVMVDYDGSVPVKSKADGAAKGKDPRQGNSSSSS
EGIKGNLNKNKVSGGQNHGDDVFSDSDGEEAAPSSTKSQTSASQTAAAGVDSGSQKEQIA
NLTHNAEQLSLRSSDPKSGASEIKDETVERAAIPNLGSSDIKAIAADASVFSFGDDDDYE
SE

Transcript Sequence

Gene sequence data has not been registered.